Start , Stop , Restart Server ?

Ok guys first of all I want to say that my ENG is rusty ,so I am sorry :-/ ...

Here is my problem ..

Iv gained FTP access to a Counter-Strike 1.6 server. I was spust to transfer files on server,so I did ..but it seams that I shuld stop server first befor doing that ... now the server is down and I am in deep-trouble ,they are all waiting ..
I cant find anywhere on smartFTP command to stop/start or restart server ,how to do that ???

I do not think you can start your counter strike server through the FTP protocol?